some attempt to generate java/php wrappers, needs more work

.gitignore

@@ -33,3 +33,8 @@ rmodel/rmodel
 runquery/VankRunQuery
 
 swig/obj/
+swig/src/go/vank_go.go
+swig/src/go/vank_gowrap.cpp
+swig/src/java/vank_jni.cpp
+swig/src/java/vank_jni.h
+

swig/src/Makefile

@@ -41,9 +41,9 @@ PROPS = $(patsubst %,$(OUTDIRPROP)/%, $(notdir $(wildcard $(JSRCUI)/properties/*
 VANK_OUTDIRPROP=$(VANK_OUTDIR)/ui/properties
 VANK_PROPS = $(patsubst %,$(VANK_OUTDIRPROP)/%, $(notdir $(wildcard $(VANK_JSRCUI)/properties/*)))
 
-#LEMUR_MFST=java/manifest.lemur
-#LEMUR_MFSTRET=java/manifest.LemurRet
-#LEMUR_MFSTIND=java/manifest.LemurIndex
+LEMUR_MFST=java/manifest.lemur
+LEMUR_MFSTRET=java/manifest.LemurRet
+LEMUR_MFSTIND=java/manifest.LemurIndex
 VANK_MFST=java/manifest.vank
 MFSTRET=java/manifest.RetUI
 MFSTIND=java/manifest.IndexUI
@@ -126,7 +126,7 @@ java-lib: $(JAVADIRS) $(VANK_PROPS) $(SOLIB) $(JARFILES)
 
 go-lib: $(OUTDIRGO) $(GOLIB)
 
-php-lib: $(OUTDIRPHP) $(PHPLIB)
+php-lib: $(OUTDIRPHP) $(PHPLIB) $(PHPINCLUDE)
 
 csharp-lib: $(OUTDIRCSHARP) $(CSHARPLIB) $(CSHARP_DLL)
 
@@ -214,7 +214,7 @@ $(GOLIB): $(OUTDIRGO)/vank_gowrap.o
 ## PHP
 php/vank_phpwrap.cpp: $(PHPINTERFACES)
 ifneq ("$(SWIG)", "")
-	$(SWIG) -php5 -c++ -o php/vank_phpwrap.cpp -outdir php $(INCLUDES) $(PHPSRC)
+	$(SWIG) -php7 -c++ -o php/vank_phpwrap.cpp -outdir php $(INCLUDES) $(PHPSRC)
 endif
 
 $(OUTDIRPHP)/vank_phpwrap.o: php/vank_phpwrap.cpp

swig/src/java/is/vank/IndexDocumentMetaCallback.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class IndexDocumentMetaCallback {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected IndexDocumentMetaCallback(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(IndexDocumentMetaCallback obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_IndexDocumentMetaCallback(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public void docMetaCallback(int docType, String docClass, SWIGTYPE_p_vank__utility__greedy_vectorT_vank__parse__MetadataPair_t metadata) {
+    vank_goJNI.IndexDocumentMetaCallback_docMetaCallback(swigCPtr, this, docType, docClass, SWIGTYPE_p_vank__utility__greedy_vectorT_vank__parse__MetadataPair_t.getCPtr(metadata));
+  }
+
+  public IndexDocumentMetaCallback() {
+    this(vank_goJNI.new_IndexDocumentMetaCallback(), true);
+  }
+
+  public final static class source_type {
+    public final static IndexDocumentMetaCallback.source_type FileSource = new IndexDocumentMetaCallback.source_type("FileSource");
+    public final static IndexDocumentMetaCallback.source_type StringSource = new IndexDocumentMetaCallback.source_type("StringSource");
+
+    public final int swigValue() {
+      return swigValue;
+    }
+
+    public String toString() {
+      return swigName;
+    }
+
+    public static source_type swigToEnum(int swigValue) {
+      if (swigValue < swigValues.length && swigValue >= 0 && swigValues[swigValue].swigValue == swigValue)
+        return swigValues[swigValue];
+      for (int i = 0; i < swigValues.length; i++)
+        if (swigValues[i].swigValue == swigValue)
+          return swigValues[i];
+      throw new IllegalArgumentException("No enum " + source_type.class + " with value " + swigValue);
+    }
+
+    private source_type(String swigName) {
+      this.swigName = swigName;
+      this.swigValue = swigNext++;
+    }
+
+    private source_type(String swigName, int swigValue) {
+      this.swigName = swigName;
+      this.swigValue = swigValue;
+      swigNext = swigValue+1;
+    }
+
+    private source_type(String swigName, source_type swigEnum) {
+      this.swigName = swigName;
+      this.swigValue = swigEnum.swigValue;
+      swigNext = this.swigValue+1;
+    }
+
+    private static source_type[] swigValues = { FileSource, StringSource };
+    private static int swigNext = 0;
+    private final int swigValue;
+    private final String swigName;
+  }
+
+}

swig/src/java/is/vank/IndexEnvironment.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+import java.util.Map;
+public class IndexEnvironment {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected IndexEnvironment(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(IndexEnvironment obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_IndexEnvironment(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public IndexEnvironment() {
+    this(vank_goJNI.new_IndexEnvironment(), true);
+  }
+
+  
+/**
+       Set the document root path
+       @param documentRoot path to document root.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setDocumentRoot(String documentRoot) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setDocumentRoot(swigCPtr, this, documentRoot);
+  }
+
+  
+/**
+ Set anchor text root path.
+@param anchorTextRoot path to anchor text root.
+@throws Exception if
+*/
+public void setAnchorTextPath(String anchorTextRoot) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setAnchorTextPath(swigCPtr, this, anchorTextRoot);
+  }
+
+  
+/**
+      Set offset metadata root path.
+      @param offsetMetadataRoot path to offset metadata root.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setOffsetMetadataPath(String offsetMetadataRoot) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setOffsetMetadataPath(swigCPtr, this, offsetMetadataRoot);
+  }
+
+  
+/**
+       Set offset annotations root path.
+       @param offsetAnnotationsRoot path to offset annotations root.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setOffsetAnnotationsPath(String offsetAnnotationsRoot) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setOffsetAnnotationsPath(swigCPtr, this, offsetAnnotationsRoot);
+  }
+
+  
+/**
+       Add parsing information for a file class. Data for these parameters
+       is passed into the FileClassEnvironmentFactory
+       @param name name of this file class, eg trecweb
+       @param iterator document iterator for this file class
+       @param parser document parser for this file class
+       @param tokenizer document tokenizer for this file class
+       @param startDocTag tag indicating start of a document
+       @param endDocTag tag indicating the end of a document
+       @param endMetadataTag tag indicating the end of the metadata fields
+       @param include default tags whose contents should be included in the index
+       @param exclude tags whose contents should be excluded from the index
+       @param index tags that should be forwarded to the index for tag extents
+       @param metadata tags whose contents should be indexed as metadata
+       @param conflations tags that should be conflated
+
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void addFileClass(String name, String iterator, String parser, String tokenizer, String startDocTag, String endDocTag, String endMetadataTag, String[] include, String[] exclude, String[] index, String[] metadata, Map conflations) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_addFileClass__SWIG_0(swigCPtr, this, name, iterator, parser, tokenizer, startDocTag, endDocTag, endMetadataTag, include, exclude, index, metadata, conflations);
+  }
+
+  
+/**
+       Get a named file class.
+       @param name The name of the file class to retrieve.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public SWIGTYPE_p_vank__parse__FileClassEnvironmentFactory__Specification getFileClassSpec(String name) throws java.lang.Exception {
+    long cPtr = vank_goJNI.IndexEnvironment_getFileClassSpec(swigCPtr, this, name);
+    return (cPtr == 0) ? null : new SWIGTYPE_p_vank__parse__FileClassEnvironmentFactory__Specification(cPtr, false);
+  }
+
+  
+/**
+       Add a file class.
+       @param spec The file class to add.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void addFileClass(SWIGTYPE_p_vank__parse__FileClassEnvironmentFactory__Specification spec) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_addFileClass__SWIG_1(swigCPtr, this, SWIGTYPE_p_vank__parse__FileClassEnvironmentFactory__Specification.getCPtr(spec));
+  }
+
+  
+/**
+       Delete an existing document.
+       @param documentID The document to delete.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void deleteDocument(int documentID) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_deleteDocument(swigCPtr, this, documentID);
+  }
+
+  
+/**
+       Set names of fields to be indexed.  This call indicates to the index that information about
+       these fields should be stored in the index so they can be used in queries.  This does not
+       affect whether or not the text in a particular field is stored in an index.
+       @param fieldNames the list of fields.
+
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setIndexedFields(String[] fieldNames) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setIndexedFields(swigCPtr, this, fieldNames);
+  }
+
+  
+/**
+       Set the numeric property of a field.
+       @param fieldName the field.
+       @param isNumeric true if the field is a numeric field, false if not.
+       @param parserName The name of the Transformation to use to compute the numeric value of the field. Repository currently recognizes the name NumericFieldAnnotator.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setNumericField(String fieldName, boolean isNumeric, String parserName) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setNumericField__SWIG_0(swigCPtr, this, fieldName, isNumeric, parserName);
+  }
+
+  
+/**
+       Set the numeric property of a field.
+       @param fieldName the field.
+       @param isNumeric true if the field is a numeric field, false if not.
+       @param parserName The name of the Transformation to use to compute the numeric value of the field. Repository currently recognizes the name NumericFieldAnnotator.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setNumericField(String fieldName, boolean isNumeric) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setNumericField__SWIG_1(swigCPtr, this, fieldName, isNumeric);
+  }
+
+  
+/**
+       Set the ordinal property of a field. If child, parent, or
+       ancestor field queries are slow, you may want to be certain to index
+       the specified fields explicitly as an ordinal. This speeds
+       things up at the cost of a minimal amount of disk space.
+       @param fieldName the field.
+       @param isOrdinal true if the field is an ordinal field, false if not.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setOrdinalField(String fieldName, boolean isOrdinal) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setOrdinalField(swigCPtr, this, fieldName, isOrdinal);
+  }
+
+  
+/**
+       Set the parental property of a field. If child, parent, or
+       ancestor field queries are slow, you may want to be certain to index
+       the specified fields explicitly as an ordinal. This speeds
+       things up at the cost of a minimal amount of disk space.
+       @param fieldName the field.
+       @param isParental true if the field is a parental field, false if not.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setParentalField(String fieldName, boolean isParental) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setParentalField(swigCPtr, this, fieldName, isParental);
+  }
+
+  
+/**
+       Set names of metadata fields to be indexed for fast retrieval.
+       The forward fields are indexed in a B-Tree mapping (documentID, metadataValue).
+       If a field is not forward indexed, the documentMetadata calls will still work, but they
+       will be slower (the document has to be retrieved, decompressed and parsed to get the metadata back,
+       instead of just a B-Tree lookup).  The backward indexed fields store a mapping of (metadataValue, documentID).
+       If a field is not backward indexed, the documentIDsFromMetadata and documentFromMetadata calls will not work.
+       @param forward the list of fields to forward index.
+       @param backward the list of fields to backward index.
+
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setMetadataIndexedFields(String[] forward, String[] backward) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setMetadataIndexedFields(swigCPtr, this, forward, backward);
+  }
+
+  
+/**
+       set the list of stopwords
+       @param stopwords the list of stopwords
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setStopwords(String[] stopwords) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setStopwords(swigCPtr, this, stopwords);
+  }
+
+  
+/**
+       set the stemmer to use
+       @param stemmer the stemmer to use. One of krovetz, porter
+
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setStemmer(String stemmer) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setStemmer(swigCPtr, this, stemmer);
+  }
+
+  
+/**
+       set the amount of memory to use for internal structures
+       @param memory the number of bytes to use.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setMemory(long memory) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setMemory(swigCPtr, this, memory);
+  }
+
+  
+/**
+       set the amount of memory to use for internal structures
+       @param memory the number of bytes to use.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setMaxDocs(long maxdocs) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setMaxDocs(swigCPtr, this, maxdocs);
+  }
+
+  
+/**
+       set normalization of case and some punctuation; default is true (normalize during indexing and at query time)
+       @param normalize True, if text should be normalized, false otherwise.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setNormalization(boolean normalize) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setNormalization(swigCPtr, this, normalize);
+  }
+
+  
+/**
+       set the storeDocs flag
+       @param flag, false to not store documents in the compressed
+              collection, true to do so (default)
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void setStoreDocs(boolean flag) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_setStoreDocs(swigCPtr, this, flag);
+  }
+
+  
+/**
+       create a new index and repository
+       @param repositoryPath the path to the repository
+       @param callback IndexStatus object to be notified of indexing progress.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void create(String repositoryPath, IndexStatus callback) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_create__SWIG_0(swigCPtr, this, repositoryPath, IndexStatus.getCPtr(callback), callback);
+  }
+
+  
+/**
+       create a new index and repository
+       @param repositoryPath the path to the repository
+       @param callback IndexStatus object to be notified of indexing progress.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void create(String repositoryPath) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_create__SWIG_1(swigCPtr, this, repositoryPath);
+  }
+
+  
+/**
+       open an existing index and repository
+       @param repositoryPath the path to the repository
+       @param callback IndexStatus object to be notified of indexing progress.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void open(String repositoryPath, IndexStatus callback) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_open__SWIG_0(swigCPtr, this, repositoryPath, IndexStatus.getCPtr(callback), callback);
+  }
+
+  
+/**
+       open an existing index and repository
+       @param repositoryPath the path to the repository
+       @param callback IndexStatus object to be notified of indexing progress.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void open(String repositoryPath) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_open__SWIG_1(swigCPtr, this, repositoryPath);
+  }
+
+  
+/**
+       close the index and repository
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void close() throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_close(swigCPtr, this);
+  }
+
+  
+/**
+       Add the text in a file to the index and repository.  The fileClass of this file
+       will be chosen based on the file extension.  If the file has no extension, it will
+       be skipped.  Information about indexing progress will be passed to the callback.
+       @param fileName the file to add
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void addFile(String fileName, IndexDocumentMetaCallback metaCB) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_addFile__SWIG_0(swigCPtr, this, fileName, IndexDocumentMetaCallback.getCPtr(metaCB), metaCB);
+  }
+
+  
+/**
+       add a file of the specified file class to the index and repository
+       @param fileName the file to add
+       @param fileClass the file class to add (eg trecweb).
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void addFile(String fileName, String fileClass, IndexDocumentMetaCallback metaCB) throws java.lang.Exception {
+    vank_goJNI.IndexEnvironment_addFile__SWIG_1(swigCPtr, this, fileName, fileClass, IndexDocumentMetaCallback.getCPtr(metaCB), metaCB);
+  }
+
+  
+/**
+
+       Adds a string to the index and repository.  The documentString is assumed to contain the kind of
+       text that would be found in a file of type fileClass.
+       @param fileName the document to add
+       @param fileClass the file class to add (eg trecweb).
+       @param metadata the metadata pairs associated with the string.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public int addString(String fileName, String fileClass, SWIGTYPE_p_std__vectorT_vank__parse__MetadataPair_t metadata) throws java.lang.Exception {
+    return vank_goJNI.IndexEnvironment_addString__SWIG_0(swigCPtr, this, fileName, fileClass, SWIGTYPE_p_std__vectorT_vank__parse__MetadataPair_t.getCPtr(metadata));
+  }
+
+  
+/**
+       Adds a string to the index and repository.  The documentString is assumed to contain the kind of
+       text that would be found in a file of type fileClass.
+       @param documentString the document string to add.
+       @param fileClass the file class, signaling which parser to use while processing the document string.
+       @param metadata a map of metadata String name to String value.
+       @param tags offset annotations to be indexed as field data. The
+       begin and end values of each TagExtent specify <b>byte</b> (not
+       character or token) offsets within the document string. These
+       byte offsets are converted to token offsets after document
+       string parsing.
+       @throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public int addString(String documentString, String fileClass, SWIGTYPE_p_std__vectorT_vank__parse__MetadataPair_t metadata, TagExtent[] tags) throws java.lang.Exception {
+    return vank_goJNI.IndexEnvironment_addString__SWIG_1(swigCPtr, this, documentString, fileClass, SWIGTYPE_p_std__vectorT_vank__parse__MetadataPair_t.getCPtr(metadata), tags);
+  }
+
+  
+/**
+       add an already parsed document to the index and repository
+       @param document the document to add
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public int addParsedDocument(SWIGTYPE_p_vank__api__ParsedDocument document) throws java.lang.Exception {
+    return vank_goJNI.IndexEnvironment_addParsedDocument(swigCPtr, this, SWIGTYPE_p_vank__api__ParsedDocument.getCPtr(document));
+  }
+
+  
+/**
+       Returns the number of documents indexed so far in this session.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public int documentsIndexed() throws java.lang.Exception {
+    return vank_goJNI.IndexEnvironment_documentsIndexed(swigCPtr, this);
+  }
+
+  
+/**
+
+       Returns the number of documents considered for indexing,
+       which is the sum of the documents indexed and the documents
+       skipped.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public int documentsSeen() throws java.lang.Exception {
+    return vank_goJNI.IndexEnvironment_documentsSeen(swigCPtr, this);
+  }
+
+}

swig/src/java/is/vank/IndexStatus.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class IndexStatus {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected IndexStatus(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(IndexStatus obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_IndexStatus(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public void status(int code, String documentPath, String error, int documentsIndexed, int documentsSeen) {
+    vank_goJNI.IndexStatus_status(swigCPtr, this, code, documentPath, error, documentsIndexed, documentsSeen);
+  }
+
+  public final static class action_code {
+    public final static IndexStatus.action_code FileOpen = new IndexStatus.action_code("FileOpen");
+    public final static IndexStatus.action_code FileSkip = new IndexStatus.action_code("FileSkip");
+    public final static IndexStatus.action_code FileError = new IndexStatus.action_code("FileError");
+    public final static IndexStatus.action_code FileClose = new IndexStatus.action_code("FileClose");
+    public final static IndexStatus.action_code DocumentCount = new IndexStatus.action_code("DocumentCount");
+
+    public final int swigValue() {
+      return swigValue;
+    }
+
+    public String toString() {
+      return swigName;
+    }
+
+    public static action_code swigToEnum(int swigValue) {
+      if (swigValue < swigValues.length && swigValue >= 0 && swigValues[swigValue].swigValue == swigValue)
+        return swigValues[swigValue];
+      for (int i = 0; i < swigValues.length; i++)
+        if (swigValues[i].swigValue == swigValue)
+          return swigValues[i];
+      throw new IllegalArgumentException("No enum " + action_code.class + " with value " + swigValue);
+    }
+
+    private action_code(String swigName) {
+      this.swigName = swigName;
+      this.swigValue = swigNext++;
+    }
+
+    private action_code(String swigName, int swigValue) {
+      this.swigName = swigName;
+      this.swigValue = swigValue;
+      swigNext = swigValue+1;
+    }
+
+    private action_code(String swigName, action_code swigEnum) {
+      this.swigName = swigName;
+      this.swigValue = swigEnum.swigValue;
+      swigNext = this.swigValue+1;
+    }
+
+    private static action_code[] swigValues = { FileOpen, FileSkip, FileError, FileClose, DocumentCount };
+    private static int swigNext = 0;
+    private final int swigValue;
+    private final String swigName;
+  }
+
+}

swig/src/java/is/vank/Parameters.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+import java.util.Map;
+public class Parameters {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected Parameters(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(Parameters obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_Parameters(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public Parameters() {
+    this(vank_goJNI.new_Parameters(), true);
+  }
+
+  public void set(String value) {
+    vank_goJNI.Parameters_set(swigCPtr, value);
+  }
+
+  public boolean get_bool(String name, boolean def) {
+    return vank_goJNI.Parameters_get_bool(swigCPtr, name, def);
+  }
+
+  public int get_int(String name, int def) {
+    return vank_goJNI.Parameters_get_int(swigCPtr, name, def);
+  }
+
+  public double get_double(String name, double def) {
+    return vank_goJNI.Parameters_get_double(swigCPtr, name, def);
+  }
+
+  public long get_INT64(String name, long def) {
+    return vank_goJNI.Parameters_get_INT64(swigCPtr, name, def);
+  }
+
+  public String get_string(String name, String def) {
+    return vank_goJNI.Parameters_get_string(swigCPtr, name, def);
+  }
+
+  public void remove(String path) {
+    vank_goJNI.Parameters_remove(swigCPtr, path);
+  }
+
+  public void set_bool(String name, boolean value) {
+    vank_goJNI.Parameters_set_bool(swigCPtr, name, value);
+  }
+
+  public void set_string(String name, String value) {
+    vank_goJNI.Parameters_set_string(swigCPtr, name, value);
+  }
+
+  public void set_int(String name, int value) {
+    vank_goJNI.Parameters_set_int(swigCPtr, name, value);
+  }
+
+  public void set_UINT64(String name, long value) {
+    vank_goJNI.Parameters_set_UINT64(swigCPtr, name, value);
+  }
+
+  public void set_double(String name, double value) {
+    vank_goJNI.Parameters_set_double(swigCPtr, name, value);
+  }
+
+  public void clear() {
+    vank_goJNI.Parameters_clear(swigCPtr);
+  }
+
+  public long size() {
+    return vank_goJNI.Parameters_size(swigCPtr);
+  }
+
+  public boolean exists(String name) {
+    return vank_goJNI.Parameters_exists(swigCPtr, name);
+  }
+
+  public void load(String text) {
+    vank_goJNI.Parameters_load(swigCPtr, text);
+  }
+
+}

swig/src/java/is/vank/ParsedDocument.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class ParsedDocument {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected ParsedDocument(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(ParsedDocument obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_ParsedDocument(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public String getContent() {
+    return vank_goJNI.ParsedDocument_getContent(swigCPtr);
+  }
+
+  public ParsedDocument() {
+    this(vank_goJNI.new_ParsedDocument(), true);
+  }
+
+}

swig/src/java/is/vank/PonteExpander.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+import java.util.Map;
+public class PonteExpander extends QueryExpander {
+  private transient long swigCPtr;
+
+  protected PonteExpander(long cPtr, boolean cMemoryOwn) {
+    super(vank_goJNI.PonteExpander_SWIGUpcast(cPtr), cMemoryOwn);
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(PonteExpander obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_PonteExpander(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+    super.delete();
+  }
+
+  public PonteExpander(QueryEnvironment env, Map param) {
+    this(vank_goJNI.new_PonteExpander(QueryEnvironment.getCPtr(env), env, param), true);
+  }
+
+  public String expand(String originalQuery, SWIGTYPE_p_std__vectorT_vank__api__ScoredExtentResult_t results) {
+    return vank_goJNI.PonteExpander_expand(swigCPtr, this, originalQuery, SWIGTYPE_p_std__vectorT_vank__api__ScoredExtentResult_t.getCPtr(results));
+  }
+
+}

swig/src/java/is/vank/QueryAnnotation.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class QueryAnnotation {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected QueryAnnotation(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(QueryAnnotation obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  
+/**
+@return ScoredExtentResults for the query tree.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_QueryAnnotation(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  
+/**
+@return QueryAnnotationNodes for the query tree.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public QueryAnnotationNode getQueryTree() throws java.lang.Exception {
+  return vank_goJNI.QueryAnnotation_getQueryTree(swigCPtr, this);
+}
+
+  
+/**
+@return Annotations for the query tree.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public java.util.Map getAnnotations() throws java.lang.Exception {
+  return vank_goJNI.QueryAnnotation_getAnnotations(swigCPtr, this);
+}
+
+  
+/**
+@return ScoredExtentResults for the query tree.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public ScoredExtentResult[] getResults() throws java.lang.Exception {
+  return vank_goJNI.QueryAnnotation_getResults(swigCPtr, this);
+}
+
+  
+/**
+@return ScoredExtentResults for the query tree.
+@throws Exception if a lemur::api::Exception was thrown by the JNI library.
+*/
+public QueryAnnotation() {
+    this(vank_goJNI.new_QueryAnnotation(), true);
+  }
+
+}

swig/src/java/is/vank/QueryAnnotationNode.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class QueryAnnotationNode {
+  private transient long swigCPtr;
+  protected transient boolean swigCMemOwn;
+
+  protected QueryAnnotationNode(long cPtr, boolean cMemoryOwn) {
+    swigCMemOwn = cMemoryOwn;
+    swigCPtr = cPtr;
+  }
+
+  protected static long getCPtr(QueryAnnotationNode obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+
+  @SuppressWarnings("deprecation")
+  protected void finalize() {
+    delete();
+  }
+
+  public synchronized void delete() {
+    if (swigCPtr != 0) {
+      if (swigCMemOwn) {
+        swigCMemOwn = false;
+        vank_goJNI.delete_QueryAnnotationNode(swigCPtr);
+      }
+      swigCPtr = 0;
+    }
+  }
+
+  public QueryAnnotationNode() {
+    this(vank_goJNI.new_QueryAnnotationNode(), true);
+  }
+
+}

swig/src/java/is/vank/SWIGTYPE_p_std__vectorT_lemur__api__DOCID_T_t.java

+/* ----------------------------------------------------------------------------
+ * This file was automatically generated by SWIG (http://www.swig.org).
+ * Version 4.0.2
+ *
+ * Do not make changes to this file unless you know what you are doing--modify
+ * the SWIG interface file instead.
+ * ----------------------------------------------------------------------------- */
+
+package is.vank;
+
+public class SWIGTYPE_p_std__vectorT_lemur__api__DOCID_T_t {
+  private transient long swigCPtr;
+
+  protected SWIGTYPE_p_std__vectorT_lemur__api__DOCID_T_t(long cPtr, @SuppressWarnings("unused") boolean futureUse) {
+    swigCPtr = cPtr;
+  }
+
+  protected SWIGTYPE_p_std__vectorT_lemur__api__DOCID_T_t() {
+    swigCPtr = 0;
+  }
+
+  protected static long getCPtr(SWIGTYPE_p_std__vectorT_lemur__api__DOCID_T_t obj) {
+    return (obj == null) ? 0 : obj.swigCPtr;
+  }
+}
+